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EPFLSTILOBMarcel LeuteneggerAbout MATLAB toolbox Flex99-12C USB correlator interface |
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MATLAB toolbox
Double class
Extended class
Single class
Flex99-12C correlator
Flex02-0xD correlator
Vector functions
MEX-Builder
The Flex99-12C by Correlator.com is an USB single-channel auto-correlator and dual-channel cross-correlator, respectively. This MATLAB interface provides an intuitive and simple access to the correlator hardware. It features automatic storage of the sample data, live preview of the correlation curve, parameter extraction for a single component and afterpulsing suppression.
Unpack the archive in a folder of your choice. Install the Flex99OEM-12C driver by Correlator.com. Copy the SDK library "Flex99-12C.dll" or "Flex99OEM-12C.dll" into the private folder and rename it to "Flex99-12C.dll". Start MATLAB and call "flex99.m".
The graphical user interface provides live control of the correlator and previews the results during acquisition. You can set-up the correlation mode (auto- or cross-correlation) and the integration time.
Curve fitting is integrated to get a rough estimation of the parameters for a single, freely diffusing component. The parameters are extracted in live operation and on recordings.
By clicking on the "File name template" button, you can define a folder and a file name used as template to save the correlation automatically. A 3-digit file number is prepended and increased automatically on every save.
Figure 1: Graphical user interface to the Flex99-12C correlator
The correlation is saved in the Zeiss/Evotec file format as used with the Confocor system. Just open the files with the corresponding fitting software for parameter extraction.
The export function can also create MAT-files. Comment and uncomment the corresponding lines in "export.m" to change the file format.
You can suppress afterpulsing by estimating its contribution to the auto-correlation signal in advance. The estimation is easy:
Although, the adaptive suppression works well for a wide range of mean intensity levels, it is recommended to estimate the afterpulsing for a different intensities from 5kHz to 2MHz.
To suppress afterpulsing, its estimated contribution is subtracted from the auto-correlation curve. Verify that the auto-correlation tends to a constant value for delays below 1us.
The MATLAB interface to the Flex99-12C USB hardware correlator is published as freeware. The author reserves the right to modify any of the contained files.
You are allowed to distribute this package as long as you deliver the entire, original package for free.
You are allowed to distribute modified versions of export.m, fitcorr.m and shutter.m as an extension package. In particular, you are not allowed to distribute a combination of modified files with other parts of the original package as a single archive.
Path | File | Description | ||
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/ | Flex99-12C.pdf | User manual | ||
flex99.m | MATLAB interface | |||
Readme.txt | Summary | |||
private/ | export.m | Save the correlation data to a file | ||
fitcorr.m | Extract the parameters | |||
flex99c12.dll | MATLAB interface library | |||
flex99c12.m | MATLAB interface help | |||
shutter.m | Automatic shutter control |
Any warranty is strictly refused. Don't rely on any financial or technical support in case of malfunction or damage.
Comments are welcome. I will try to track reported problems and fix bugs.
Initial release
Bug fixed in control.dll
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Release 1.1: A user manual was added, as well as zooming into the correlation and resizing of the main window.
Minor updates of the help file.
Release 1.2: Added a context menu to clear and hide the intensity traces.
Bug fix: substituted CPUTIME by NOW for compatibility with MATLAB 7.x.
Bug fix: file name template specification now compatible with MATLAB 7.x.
Downloading these files, you accept the copyright terms.
MATLAB is a registered trademark of The MathWorks, Inc. Windows is a trademark of Microsoft Corp. Confocor is a trademark of Carl Zeiss. Other product or brand names are trademarks or registered trademarks of their respective holders.
© 2011 École Polytechnique Fédérale de Lausanne